Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790279.1_cds_XP_016500964.1_1390
CDS Infomation

[gene=LOC107819367] [db_xref=GeneID:107819367] [protein=pectinesterase-like] [protein_id=XP_016500964.1] [location=join(24768..25725,26424..27112)] [gbkey=CDS]
Sequence

ATGGCTACTAATTCCTCTCAACCATTGTTAGACACTCCCAAAACAAAATCCTCCTCTTCT
AAAGCTCTCTATATTCTTCTGTCCTTAGCTGCTATTGTGGGCTCAGTTGGATTAGTTTCA
ATCTGGGCCATCAATGGCAGCAGCTCATCAATTTCCTTGACAGCCCATGTTTGTGATCAG
GCCCATGATCAGCCATCTTGCTTGGCCACGGTGTCTGAGGTTGCACCTGCTGGTTTGATG
GATACCACGACAGTGGATTTGTTACAGATGGTTTTGCATAAATCATCGTTAAAAATCCAT
GAGACGATCGATTTAGTGAGCAATGTGAACGGTCGGATTAATAATGACAACGAGCAAGCA
GCTCTAGCAGATTGTCTAGAGTTAATGAATTTGTCAAGGGACAGATTAATGGACTCCATG
ATGGCACTGGGGAACCTATCGGCCCAAGCCCATTTTGACGTCCATACATGGCTAAGTAGC
ATTCTGACCAACCATGCTACATGCATGGATGGGCTAAACGGTCAGGCCCAGTCCATTATG
AAGCCCATGTTGAAGGATTTGATAGTAAGAGCAAAGACTTCCTTAGCCTTGATGGTTAAA
ATGACACCATCTAATACCATGGATCTTCCATCAGTTACTGATGGATTACCCTCATGGGTT
ACTTCTAATGATAGAAGGCTTTTGCAACTATCTGCAAATGCCATAAAAGCCAATGTAATA
GTGGCCAAAGATGGTAGTGGAAAATATAAGACTGTAAAGGAAGCAGTTGCATCAGCTCCA
GATAATAGCAAGACTCGTTATGTTATATATGTGAAAAAAGGAATATACAAAGAGAATGTT
GAGATTGGGAAAAAGAAGAAAAATGTGATGCTTGTTGGTGATGGTATGGATGCTACTATT
ATCACTGGCAGCTTGAATGTTGTCGATGGTTCAACAACCTTCAAATCTGCAACTGTTGCT
GCTGTTGGGGATGGATTCATAGCCCAAGATCTGCGGTTTCAAAACACAGCAGGAGCAGCA
AAACACCAAGCAGTAGCACTTCGTGTTGGAGCAGATCAATCAGTCATCAATCGTTGCAAA
ATAGATGCATTCCAAGATACCCTCTATGCCCACAGCCTCCGCCAATTCTACAGAGATTGT
TACATCGCTGGCACTGTTGATTTCATCTTTGGTAATGCAGCAGTCGTGTTCCAAAACTCA
AAAATCGCAGCACGAAAGCCCGGGCCTGGACAAAAGAACATGGTTACAGCCCAAGGTCGT
GAAGATCCAAACCAAAATACAGGAACTTCAATCCAAAATTGTGATATTATTGCTACCTCA
GACCTTGCACCAGTGAAAGGGTCCGTTAAGACATATTTGGGCCGTCCATGGAAAGCGTAC
TCACGAACTGTATTTATGCAGTCCAATATTGGAGACCATATTGACCCAGAGGGTTGGTCA
GTATGGCAAGGTGATTTTGCCTTGAAAACTTTATATTATGGTGAGTATATGAACAAAGGA
CCTGGAGCTGGAACTAGTAAGAGAGTGAAGTGGCCTGGTTATCATATTTTAAATGCAGCA
GAGGCGAGGAAATTCACAGTGGGTCAGCTGATTCAAGGAGGAGCATGGTTGAAATCCACT
GGTGTGGCTTACACTGAGGGGTTGTGA

Peptide Sequence

PEP ID

XP_016500964.1
PEP Infomation

PREDICTED: pectinesterase-like [Nicotiana tabacum]
Sequence

MATNSSQPLLDTPKTKSSSSKALYILLSLAAIVGSVGLVSIWAINGSSSSISLTAHVCDQ
AHDQPSCLATVSEVAPAGLMDTTTVDLLQMVLHKSSLKIHETIDLVSNVNGRINNDNEQA
ALADCLELMNLSRDRLMDSMMALGNLSAQAHFDVHTWLSSILTNHATCMDGLNGQAQSIM
KPMLKDLIVRAKTSLALMVKMTPSNTMDLPSVTDGLPSWVTSNDRRLLQLSANAIKANVI
VAKDGSGKYKTVKEAVASAPDNSKTRYVIYVKKGIYKENVEIGKKKKNVMLVGDGMDATI
ITGSLNVVDGSTTFKSATVAAVGDGFIAQDLRFQNTAGAAKHQAVALRVGADQSVINRCK
IDAFQDTLYAHSLRQFYRDCYIAGTVDFIFGNAAVVFQNSKIAARKPGPGQKNMVTAQGR
EDPNQNTGTSIQNCDIIATSDLAPVKGSVKTYLGRPWKAYSRTVFMQSNIGDHIDPEGWS
VWQGDFALKTLYYGEYMNKGPGAGTSKRVKWPGYHILNAAEARKFTVGQLIQGGAWLKST
GVAYTEGL

Transcript Sequence

Gene sequence data has not been registered.